325 lines
14 KiB
JavaScript
325 lines
14 KiB
JavaScript
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"translatorID": "ce5f2849-4500-47cc-8d7d-3fc0a1de9848",
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"label": "Microbiology Society Journals",
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/*
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***** BEGIN LICENSE BLOCK *****
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Copyright © 2016 Philipp Zumstein
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This file is part of Zotero.
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Zotero is free software: you can redistribute it and/or modify
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it under the terms of the GNU Affero General Public License as published by
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the Free Software Foundation, either version 3 of the License, or
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(at your option) any later version.
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Zotero is distributed in the hope that it will be useful,
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but WITHOUT ANY WARRANTY; without even the implied warranty of
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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GNU Affero General Public License for more details.
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You should have received a copy of the GNU Affero General Public License
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along with Zotero. If not, see <http://www.gnu.org/licenses/>.
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***** END LICENSE BLOCK *****
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*/
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{
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"type": "web",
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"url": "http://jmm.microbiologyresearch.org/content/journal/jmm/10.1099/00222615-15-2-189",
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"items": [
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{
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"itemType": "journalArticle",
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"title": "The Microbial Ecology of the Large Bowel of Breastfed and Formula-fed Infants During the First Year of Life",
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{
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"lastName": "Stark",
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{
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"lastName": "Lee",
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"firstName": "A.",
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"creatorType": "author"
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}
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"date": "1982",
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"DOI": "10.1099/00222615-15-2-189",
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"abstractNote": "The succession of bacterial populations in the large bowel of seven breast-fed and seven formula-fed infants was examined during the first year of life. The composition of the intestinal microflora varied according to the infant's diet. During the first week of life breast-fed and formula-fed infants were colonised by enterobacteria and enterococci followed by bifidobacteria, Bacteroides spp., clostridia and anaerobic streptococci. From week 4 until solid foods were given, breast-fed babies had a simple flora consisting of bifidobacteria and relatively few enterobacteria and enterococci. Formula-fed babies during the corresponding period were more often colonised by other anaerobes in addition to bifidobacteria and had higher counts of facultatively anaerobic bacteria. The introduction of solid food to the breast-fed infants caused a major disturbance in the microbial ecology of the large bowel as counts of enterobacteria and enterococci rose sharply and colonisation by Bacteroides spp., clostridia and anaerobic streptococci occurred. This was not observed when formula-fed infants began to take solids; instead, counts of facultative anaerobes remained high while colonisation by anaerobes other than bifidobacteria continued. At 12 months, the anaerobic bacterial populations of the large bowel of breast-fed and formula-fed infants were beginning to resemble those of adults in number and composition and there was a corresponding decrease in the number of facultative anaerobes. These changes are discussed in relation to changes in susceptibility to gastro-intestinal infection.",
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"issue": "2",
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"pages": "189-203",
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"publicationTitle": "Journal of Medical Microbiology",
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"url": "http://jmm.microbiologyresearch.org/content/journal/jmm/10.1099/00222615-15-2-189",
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{
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"type": "web",
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"url": "http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.000872",
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{
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"itemType": "journalArticle",
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"creators": [
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{
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"lastName": "Vandamme",
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"firstName": "Peter A.",
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"creatorType": "author"
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},
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{
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"lastName": "Peeters",
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"firstName": "Charlotte",
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"creatorType": "author"
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},
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{
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"lastName": "Cnockaert",
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"firstName": "Margo",
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"creatorType": "author"
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},
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{
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"lastName": "Gomila",
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"firstName": "Margarita",
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"creatorType": "author"
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},
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{
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"lastName": "Moore",
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"firstName": "Edward R. B.",
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"creatorType": "author"
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},
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{
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"lastName": "Spilker",
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"firstName": "Theodore",
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"creatorType": "author"
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},
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{
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"lastName": "LiPuma",
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"firstName": "John J.",
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"creatorType": "author"
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}
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],
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"date": "2016",
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"DOI": "10.1099/ijsem.0.000872",
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"abstractNote": "A repeat multi-locus sequence analysis (MLSA) of concatenated nusA, eno, rpoB, gltB, lepA, nuoL and nrdA sequences of strains classified as Achromobacter marplatensis was performed. The results revealed that earlier reported sequence data of the proposed type strain were erroneous, and that the corrected concatenated sequence divergence between the A. marplatensis LMG 26219T ( = CCUG 56371T) sequence type and that of strains of Achromobacter spiritinus was well below the 2.1 % threshold value that delineates species of the genus Achromobacter. These results therefore demonstrated that strains which were classified as A. spiritinus should be reclassified as A. marplatensis and that the name Achromobacter spiritinus should no longer be used. An emendation of the description of Achromobacter marplatensis is warranted.",
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"issue": "4",
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"libraryCatalog": "Microbiology Society Journals",
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"pages": "1641-1644",
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"publicationTitle": "International Journal of Systematic and Evolutionary Microbiology",
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"url": "http://ijs.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.000872",
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"volume": "66",
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"type": "web",
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"url": "http://mic.microbiologyresearch.org/search?value1=h2o&option1=all&option2=pub_serialIdent&value2=&operator2=AND",
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"url": "https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.004683?crawler=true",
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"items": [
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{
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"itemType": "journalArticle",
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"title": "Desulfovibrio subterraneus sp. nov., a mesophilic sulfate-reducing deltaproteobacterium isolated from a deep siliceous mudstone formation",
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{
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"creatorType": "author"
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},
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},
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{
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"lastName": "Miyakawa",
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"firstName": "Kazuya",
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"creatorType": "author"
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},
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{
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"lastName": "Tamaki",
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"firstName": "Hideyuki",
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"creatorType": "author"
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},
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{
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"lastName": "Naganuma",
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"firstName": "Takeshi",
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"creatorType": "author"
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},
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{
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"lastName": "Kaneko",
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"firstName": "Katsuhiko",
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"creatorType": "author"
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}
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],
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"date": "2021",
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"DOI": "10.1099/ijsem.0.004683",
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"ISSN": "1466-5026,",
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"abstractNote": "A novel mesophilic sulfate-reducing bacterium, strain HN2<span class=\"jp-sup\">T</span>, was isolated from groundwater sampled from the subsurface siliceous mudstone of the Wakkanai Formation located in Horonobe, Hokkaido, Japan. The bacterium was Gram-negative and vibrio-shaped, and its motility was conferred by a single polar flagellum. Cells had desulfoviridin. Catalase and oxidase activities were not detected. It grew in the temperature range of 25–40 °C (optimum, 35 °C) and pH range of 6.3–8.1 (optimum, pH 7.2–7.6). It used sulfate, thiosulfate, dimethyl sulfoxide, anthraquinone-2,6-disulfonate, Fe<span class=\"jp-sup\">3+</span>, and manganese oxide, but not elemental sulfur, nitrite, nitrate, or fumarate as electron acceptors. The strain showed weak growth with sulfite as the electron acceptor. Fermentative growth with pyruvate, lactate and cysteine was observed in the absence of sulfate, but not with malate or fumarate. NaCl was not required, but the strain tolerated up to 40 g l<span class=\"jp-sup\">–1</span>. Strain HN2<span class=\"jp-sup\">T</span> did not require vitamins. The major cellular fatty acids were iso-C<span class=\"jp-sub\">15 : 0</span> (23.8 %), C<span class=\"jp-sub\">18 : 1</span> <span class=\"jp-italic\"> ω</span>9<span class=\"jp-italic\">t</span> (18.4 %), C<span class=\"jp-sub\">18 : 0</span> (15.0 %), C<span class=\"jp-sub\">16 : 0</span> (14.5 %), and anteiso-C<span class=\"jp-sub\">17 :0</span> (10.1 %). The major respiratory quinone was menaquinone MK-6(H<span class=\"jp-sub\">2</span>). The G+C content of the genomic DNA was 56.7 mol%. Based on 16S rRNA gene sequence analysis, the closest phylogenetic relative of strain HN2<span class=\"jp-sup\">T</span> is <span class=\"jp-italic\"> <span class=\"named-content-species\"> <a class=\"namesforlife\" href=\"http://doi.org/10.1601/nm.13309\" rel=\"namesforlife-name\" target=\"xrefwindow\" title=\"Desulfovibrio psychrotolerans - Click to open Names for Life widget\">Desulfovibrio psychrotolerans</a> </span> </span> JS1<span class=\"jp-sup\">T</span> (97.0 %). Digital DNA–DNA hybridization (dDDH) and average nucleotide identity (ANI) values of the strains HN2<span class=\"jp-sup\">T</span> and <span class=\"jp-italic\"> <span class=\"named-content-species\"> <a class=\"namesforlife\" href=\"http://doi.org/10.1601/nm.13309\" rel=\"namesforlife-name\" target=\"xrefwindow\" title=\"D. psychrotolerans - Click to open Names for Life widget\">D. psychrotolerans</a> </span> </span> JS1<span class=\"jp-sup\">T</span> were 22.2 and 79.8 %, respectively. Based on the phenotypic and molecular genetic evidence, we propose a novel species, <span class=\"jp-italic\">D. subterraneus</span> sp. nov. with the type strain HN2<span class=\"jp-sup\">T</span> (=DSM 101010<span class=\"jp-sup\">T</span>=NBRC 112213<span class=\"jp-sup\">T</span>).,",
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"issue": "2",
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"libraryCatalog": "Microbiology Society Journals",
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"pages": "004683",
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"publicationTitle": "International Journal of Systematic and Evolutionary Microbiology",
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"url": "https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.004683",
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"volume": "71",
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/** END TEST CASES **/
|